BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D04SP1|AL424951
(962 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1283 1817 0.0
>3x_Contig1283
Length = 6261
Score = 1817 bits (908), Expect = 0.0
Identities = 934/951 (98%), Gaps = 1/951 (0%)
Strand = Plus / Minus
Query: 1 gcaaatgatgtgttcaattgatttatcgtttggatccactgtatcccgctggctgctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1783 gcaaatgatgtgttcaattgatttatcgtttggatccactgtatcccgctggctgctatg 1724
Query: 61 gcttgatatagtttcgcagttgaataattggcaactccaaacacagtacggcagttgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1723 gcttgatatagtttcgcagttgaataattggcaactccaaacacagtacggcagttgagc 1664
Query: 121 tgaaataatctatgaaaaagatactcaggcaaaggtattagcggtgcgacattatacctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1663 tgaaataatctatgaaaaagatactcaggcaaaggtattagcggtgcgacattatacctc 1604
Query: 181 tcagtatagctcatctccttagcagcccctgagtgtatcagggtcttggtttccatcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1603 tcagtatagctcatctccttagcagcccctgagtgtatcagggtcttggtttccatcttt 1544
Query: 241 ttgtccgtcccagtatattcctgttaaacttttaattcgacttctcttcaaggaaaatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1543 ttgtccgtcccagtatattcctgttaaacttttaattcgacttctcttcaaggaaaatca 1484
Query: 301 attttgtcaagttagttcttgtacaggaaaatgtgacaaagaaaatgcaaagttacacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1483 attttgtcaagttagttcttgtacaggaaaatgtgacaaagaaaatgcaaagttacacga 1424
Query: 361 tggacaaaaggtaacagtagttttymagtactcaatcgcacgcacgtcatgtggctctta 420
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1423 tggacaaaaggtaacagtagtttttaagtactcaatcgcacgcacgtcatgtggctctta 1364
Query: 421 ataggtgagtattgatattatyatgaactgacaaggtgaaatccggtatgamaaasgtag 480
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||
Sbjct: 1363 ataggtgagtattgatattattatgaactgacaaggtgaaatccggtatgaaaaaggtag 1304
Query: 481 gacggaagccagamagamaagtattgctataamaggmagaattatgatgnccaagtsccc 540
||||||||| ||| ||| |||||||||||||| ||| |||||||||||| |||||| |||
Sbjct: 1303 gacggaagctagaaagaaaagtattgctataaaaggaagaattatgatgtccaagtgccc 1244
Query: 541 ttttcctagtgaggaatagggaatgcttaacataaatmamaagaatccactgcccaatat 600
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 1243 ttttcctagtgaggaatagggaatgcttaacataaataaaaagaatccactgcccaatat 1184
Query: 601 gaacactattagggacaggatagaactataggttttccgaaagacattgamatgaacttt 660
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1183 gaacactattagggacaggatagaactataggttttccgaaagacattgaaatgaacttt 1124
Query: 661 aaaattgaagagaaatatgatatgcaaagggggggagcgtaggatagcattgaacaacgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 aaaattgaagagaaatatgatatgcaaagggggggagcgtaggatagcattgaacaacgg 1064
Query: 721 tgttgcctgcaacaagtaggcatatgagaagtaactatttgtatgcacattaatttcgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 tgttgcctgcaacaagtaggcatatgagaagtaactatttgtatgcacattaatttcgtg 1004
Query: 781 tattaatttcattttctttggatgtgctgggtagaacgttacattaatgcatttgtattt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 tattaatttcattttctttggatgtgctgggtagaacgttacattaatgcatttgtattt 944
Query: 841 gcatatttccttctctcaactagtctttttttttgtttttagttttccttttgtcttgtc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 gcatatttccttctctcaactagtctttttttttgtttttagttttccttttgtcttgtc 884
Query: 901 ggttctatatcagtttgccagtcaatctatatatatcg-tagatgacamcc 950
|||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 883 ggttctatatcagtttgccagtcaatctatatatatcgttagatgacaacc 833
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7327
Number of Sequences: 1807
Number of extensions: 7327
Number of successful extensions: 93
Number of sequences better than 1.0e-20: 1
length of query: 962
length of database: 10,358,551
effective HSP length: 16
effective length of query: 946
effective length of database: 10,329,639
effective search space: 9771838494
effective search space used: 9771838494
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)